RBGE’s bioinformatics and data management

Here you will find information about genomic data management and tutorials of the most common bioinformatics pipelines used at the Royal Botanic Garden Edinburgh, RBGE.

Wet Laboratory:

• Wet Lab Notebook Template

Data management:

• Setting up your working environment
• Where do I store my data?
• Where do I run my analysis?
• Installing Software

Quality of the raw reads:

• Raw reads
• FastQC
• Trimmomatic
• Cutadapt

Target Capture:

• Mapping reads
• Alignment
• Inferring a phylogeny

Contact:

• Getting in touch